abstract：:Soil microorganisms historically have been a rich resource for natural product discovery, yet the majority of these microbes remain uncultivated and their biosynthetic capacity is left underexplored. To identify the biosynthetic potential of soil microorganisms using a culture-independent approach, we constructed a la...

journal_title：Frontiers in microbiology

authors： Santana-Pereira ALR,Sandoval-Powers M,Monsma S,Zhou J,Santos SR,Mead DA,Liles MR

更新日期：2020-12-07 00:00:00

abstract：:The intestinal microbial composition and metabolic functions under normal physiological conditions in the donkey are crucial for health and production performance. However, compared with other animal species, limited information is currently available regarding the intestinal microbiota of donkeys. In the present stud...

journal_title：Frontiers in microbiology

authors： Zhang R,Zhang J,Dang W,Irwin DM,Wang Z,Zhang S

更新日期：2020-12-04 00:00:00

abstract：:Wheat scab caused by F. graminearum is a highly destructive disease that leads to yield reduction and mycotoxin contamination of grains. In this study, an endophytic bacterium of strain YB-130 was isolated from surface sterilized wheat spikes with scab symptoms and identified as Bacillus velezensis by whole genome ann...

journal_title：Frontiers in microbiology

authors： Xu W,Zhang L,Goodwin PH,Xia M,Zhang J,Wang Q,Liang J,Sun R,Wu C,Yang L

更新日期：2020-12-03 00:00:00

abstract：:The rise of antibiotic resistance is not only a challenge for human and animal health treatments, but is also posing the risk of spreading among bacterial populations in foodstuffs. Farmed fish-related foodstuffs, the food of animal origin most consumed worldwide, are suspected to be a reservoir of antibiotic resistan...

journal_title：Frontiers in microbiology

authors： Helsens N,Calvez S,Prevost H,Bouju-Albert A,Maillet A,Rossero A,Hurtaud-Pessel D,Zagorec M,Magras C

更新日期：2020-12-03 00:00:00

abstract：:Neisseria gonorrhoeae infections are a serious global health problem. This organism has developed disturbing levels of antibiotic resistance, resulting in the need for new approaches to prevent and treat gonorrhea. The genus Neisseria also includes several members of the human microbiome that live in close association...

journal_title：Frontiers in microbiology

authors： Aho EL,Ogle JM,Finck AM

更新日期：2020-12-03 00:00:00

abstract：:After the first outbreak in China in 2006, human adenovirus type 55 (HAdV-B55) has become a common pathogen causing life threatening pneumonia in northern China. However, HAdV-B55 infection has been rarely reported in southern China. Here, we collected throat swabs from 3,192 hospitalized children with acute respirato...

journal_title：Frontiers in microbiology

authors： Chen SY,Liu W,Xu Y,Qiu S,Chen Y,Tian X,Zhou R

更新日期：2020-12-02 00:00:00

abstract：:Objective: To evaluate the diagnostic performance of metagenomic next-generation sequencing (mNGS) using bronchoalveolar lavage fluid (BALF) in patients with ventilator-associated pneumonia (VAP). Methods: BALF samples of 72 patients with VAP were collected from August 2018 to May 2020. The diagnostic performance of c...

journal_title：Frontiers in microbiology

authors： Fang X,Mei Q,Fan X,Zhu C,Yang T,Zhang L,Geng S,Pan A

更新日期：2020-12-01 00:00:00

abstract：:Carbapenem-resistant Acinetobacter baumannii (CRAB) are emerging worldwide. In South America, clinical isolates presenting such a phenotype usually do not belong to the globally distributed international clone 2 (IC2). The majority of these isolates are also resistant to multiple other antimicrobials and are often des...

journal_title：Frontiers in microbiology

authors： Nodari CS,Cayô R,Streling AP,Lei F,Wille J,Almeida MS,de Paula AI,Pignatari ACC,Seifert H,Higgins PG,Gales AC

更新日期：2020-11-30 00:00:00

abstract：:Long-term continuous cropping influences the nutrient of soil and microbiome of the rhizosphere, resulting in the yield decrease of crops. Tibetan barley is a dominant cereal crop cultivated at high altitudes in Tibet. Its growth and yield are negatively affected by continuous cropping; however, the response of the rh...

journal_title：Frontiers in microbiology

authors： Yao Y,Yao X,An L,Bai Y,Xie D,Wu K

更新日期：2020-11-30 00:00:00

abstract：:Long-term monoculture cropping is usually accompanied by soil acidification and microbial community shifts. Soil aluminum ions are dissolved under acidic condition (pH < 5.0), and the resulting aluminum bioavailability can cause toxic effects in plants. In this study, we investigated the bacterial community compositio...

journal_title：Frontiers in microbiology

authors： Zhang S,Jiang Q,Liu X,Liu L,Ding W

更新日期：2020-11-30 00:00:00

abstract：:Intramembrane proteases (IMPs) are a unique class of proteases that catalyze the proteolysis within the membrane and regulate diverse cellular processes in various organisms. RseP, an Escherichia coli site-2 protease (S2P) family IMP, is involved in the regulation of an extracytoplasmic stress response through the cle...

journal_title：Frontiers in microbiology

authors： Miyake T,Hizukuri Y,Akiyama Y

更新日期：2020-11-27 00:00:00

abstract：:Gut microbiota (GM) modifies the intrahepatic immune microenvironment, but the underlying mechanisms remain poorly understood. Liver fibrosis-associated imprinting is predicted to be reflected in GM. This study investigated the link between GM and the intrahepatic T cell receptor (TCR) immune repertoire (IR), and whet...

journal_title：Frontiers in microbiology

authors： Liang Q,Zhang M,Hu Y,Zhang W,Zhu P,Chen Y,Xue P,Li Q,Wang K

更新日期：2020-11-27 00:00:00

abstract：:A Viable but non-culturable (VBNC) state is a bacterial survival strategy under reverse conditions. It poses a significant challenge for public health and food safety. In this study, the effect of external environmental conditions including acid, nutrition, and salt concentrations on the formation of S. aureus VBNC st...

journal_title：Frontiers in microbiology

authors： Li Y,Huang TY,Mao Y,Chen Y,Shi F,Peng R,Chen J,Yuan L,Bai C,Chen L,Wang K,Liu J

更新日期：2020-11-26 00:00:00

abstract：:Phagosome- and xenophagosome-lysosome systems play a critical role in the defense of pathogenic bacteria, such as Salmonella and S. aureus, in macrophages. A great part of the bacteria escapes from the digestion and can survive through some mechanisms that are still poorly understood and which require further explorat...

journal_title：Frontiers in microbiology

authors： Rao S,Xu T,Xia Y,Zhang H

更新日期：2020-11-26 00:00:00

abstract：:Monacolin K (MK) is a secondary metabolite of the Monascus species that can inhibit cholesterol synthesis. Functional red mold rice (FRMR) is the fermentation product of Monascus spp., which is rich in MK. FRMR is usually employed to regulate serum cholesterol, especially for hypercholesterolemic patients who refuse s...

journal_title：Frontiers in microbiology

authors： Yanli F,Xiang Y

更新日期：2020-11-25 00:00:00

abstract：:Powdery mildew infects a wide range of crops and economic plants, causing substantial losses. Rubber trees (Hevea brasiliensis) are the primary source of natural rubber, and powdery mildew infection causes significant losses to natural rubber yields. How the causal agent, Erysiphe quercicola, establishes successful in...

journal_title：Frontiers in microbiology

authors： Li X,Liu Y,He Q,Li S,Liu W,Lin C,Miao W

更新日期：2020-11-24 00:00:00

abstract：:Coronavirus disease 2019 (COVID-19), caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) virus, has emerged as a global pandemic worldwide. In this study, we used ARTIC primers-based amplicon sequencing to profile 225 SARS-CoV-2 genomes from India. Phylogenetic analysis of 202 high-quality assem...

journal_title：Frontiers in microbiology

authors： Raghav S,Ghosh A,Turuk J,Kumar S,Jha A,Madhulika S,Priyadarshini M,Biswas VK,Shyamli PS,Singh B,Singh N,Singh D,Datey A,Avula K,Smita S,Sabat J,Bhattacharya D,Kshatri JS,Vasudevan D,Suryawanshi A,Dash R,Senapati

更新日期：2020-11-23 00:00:00

abstract：:Genitourinary syndrome of menopause (GSM) is a chronic and progressive condition with a series of vulvovaginal, sexual, and lower urinary tract discomforts, mainly due to hypoestrogenism. Menopausal hormone therapy (MHT) has generally been considered as the most effective treatment for GSM. In addition, vaginal microb...

journal_title：Frontiers in microbiology

authors： Geng L,Huang W,Jiang S,Zheng Y,Zhou Y,Zhou Y,Hu J,Li P,Tao M

更新日期：2020-11-20 00:00:00

abstract：:The safety of healthcare workers (HCWs) against severe acute respiratory syndrome virus 2 (SARS-CoV-2) transmission is an important aspect of managing the coronavirus disease 2019 (COVID-19) pandemic. In the South Korea, highly stringent infection prevention and control (IPC) guidelines are implemented, and reports of...

journal_title：Frontiers in microbiology

authors： Ko JH,Lee JY,Kim HA,Kang SJ,Baek JY,Park SJ,Hyun M,Jo IJ,Chung CR,Kim YJ,Kang ES,Choi YK,Chang HH,Jung SI,Peck KR

更新日期：2020-11-20 00:00:00

abstract：:Mechanisms of gastrointestinal protection by probiotic bacteria against infection involve amongst others, modulation of intestinal epithelial barrier function. Trans-epithelial electrical resistance (TEER) is widely used to evaluate cellular barrier functions. Here, we developed a two-stage interpretative model of the...

journal_title：Frontiers in microbiology

authors： Yuan L,van der Mei HC,Busscher HJ,Peterson BW

更新日期：2020-11-19 00:00:00

abstract：:Parys Mountain or Mynydd Parys (Isle of Anglesey, United Kingdom) is a mine-impacted environment, which accommodates a variety of acidophilic organisms. Our previous research of water and sediments from one of the surface acidic streams showed a high proportion of archaea in the total microbial community. To understan...

journal_title：Frontiers in microbiology

authors： Distaso MA,Bargiela R,Brailsford FL,Williams GB,Wright S,Lunev EA,Toshchakov SV,Yakimov MM,Jones DL,Golyshin PN,Golyshina OV

更新日期：2020-11-17 00:00:00

abstract：:Autophagy plays an important role in cell growth and development. The autophagy-related gene atg4 encodes a cysteine protease, which can cleave the carboxyl terminus of Atg8, thus plays a role in autophagosome formation in yeast and filamentous fungi. Arthrobotrys oligospora is well known for producing special trappin...

journal_title：Frontiers in microbiology

authors： Zhou D,Xie M,Bai N,Yang L,Zhang KQ,Yang J

更新日期：2020-11-16 00:00:00

abstract：:Indole is a signal molecule derived from the conversion of tryptophan, and it is present in bacterial respiratory gas. Besides influencing bacterial growth, indole exhibits effects on human health, including a positive effect on inflammation and protection against pathogens. However, a high fecal indole concentration ...

journal_title：Frontiers in microbiology

authors： Koga N,Hosomi T,Zwama M,Jirayupat C,Yanagida T,Nishino K,Yamasaki S

更新日期：2020-11-16 00:00:00

abstract：:The incidence of non-alcoholic fatty liver disease (NAFLD) is rising annually, and emerging evidence suggests that the gut bacteria plays a causal role in NAFLD. Naringin, a natural flavanone enriched in citrus fruits, is reported to reduce hepatic lipid accumulation, but to date, no investigations have examined wheth...

journal_title：Frontiers in microbiology

authors： Mu H,Zhou Q,Yang R,Zeng J,Li X,Zhang R,Tang W,Li H,Wang S,Shen T,Huang X,Dou L,Dong J

更新日期：2020-11-13 00:00:00

abstract：:Fusarium graminearum virus 1 (FgV1) is a positive-sense ssRNA virus that confers hypovirulence in its fungal host, Fusarium graminearum. Like most mycoviruses, FgV1 exists in fungal cells, lacks an extracellular life cycle, and is therefore transmitted during sporulation or hyphal anastomosis. To understand FgV1 evolu...

journal_title：Frontiers in microbiology

authors： Heo JI,Yu J,Choi H,Kim KH

更新日期：2020-11-12 00:00:00

abstract：:Odoribacter splanchnicus, belonging to the order Bacteroidales, is a common, short-chain fatty acid producing member of the human intestinal microbiota. A decreased abundance of Odoribacter has been linked to different microbiota-associated diseases, such as non-alcoholic fatty liver disease, cystic fibrosis and infla...

journal_title：Frontiers in microbiology

authors： Hiippala K,Barreto G,Burrello C,Diaz-Basabe A,Suutarinen M,Kainulainen V,Bowers JR,Lemmer D,Engelthaler DM,Eklund KK,Facciotti F,Satokari R

更新日期：2020-11-12 00:00:00

abstract：:Previously, we showed that Bacillus amyloliquefaciens FZB42 can confer salt tolerance in plants by root inoculation under salt stress condition, and the FZB42 volatile organic compounds (VOCs) promoted plant growth and development under non-salt stress condition. In the present study, we investigated the mechanism tha...

journal_title：Frontiers in microbiology

authors： Liu S,Tian Y,Jia M,Lu X,Yue L,Zhao X,Jin W,Wang Y,Zhang Y,Xie Z,Wang R

更新日期：2020-11-12 00:00:00

abstract：:Aeolian prokaryotic communities (APC) are important components of bioaerosols that are transported freely or attached to dust particles suspended in the atmosphere. Terrestrial and marine ecosystems are known to release and receive significant prokaryote loads into and from the surrounded atmospheric air. However, com...

journal_title：Frontiers in microbiology

authors： Aalismail NA,Díaz-Rúa R,Ngugi DK,Cusack M,Duarte CM

更新日期：2020-11-12 00:00:00

abstract：:In this study, Taisui TS-2007S, a previously unidentified biological object discovered in soil in China, was identified. TS-2007S was shown to contain abundant carbohydrates but a scarcity of protein, fat, and minerals. The exopolymers of TS-2007S showed FT-IR spectra that were similar to those of xanthan gum (XG) but...

journal_title：Frontiers in microbiology

authors： Su T,Liu H,Zhang C,Shang D,Wang C,Qiu L

更新日期：2020-11-11 00:00:00

abstract：:Retrospective studies involving the screening of frozen stored collections of samples are commonplace when a new threat emerges, but it has been demonstrated that the freeze-thaw process can affect bacterial viability. The study of colistin-resistant bacteria in human and animal samples is an example of this issue. In...

journal_title：Frontiers in microbiology

authors： Miguela-Villoldo P,Moreno MA,Hernández M,Rodríguez-Lázaro D,Gallardo A,Borge C,Quesada A,Domínguez L,Ugarte-Ruiz M

更新日期：2020-11-09 00:00:00

abstract：:Escherichia coli O157:H7 is regarded as one of the most harmful pathogenic microorganisms related to foodborne diseases. This paper proposes a rapid-detection biosensor for the sensitive and quantitative analysis of E. coli O157:H7 in biological samples by surface-enhanced Raman scattering (SERS)-based lateral flow im...

journal_title：Frontiers in microbiology

authors： Shi L,Xu L,Xiao R,Zhou Z,Wang C,Wang S,Gu B

更新日期：2020-11-06 00:00:00

abstract：:Chironomids (Diptera; Chironomidae), also known as non-biting midges, are one of the most abundant insects in freshwater habitats. Our aim was to understand whether the metamorphosis developmental stages affect the endogenous microbiota composition of Chironomus transvaalensis. Toward our objective, we analyzed the en...

journal_title：Frontiers in microbiology

authors： Sela R,Laviad-Shitrit S,Halpern M

更新日期：2020-11-06 00:00:00

abstract：:Polycyclic aromatic hydrocarbons (PAHs) are widespread across the globe mainly due to long-term anthropogenic sources of pollution. The inherent properties of PAHs such as heterocyclic aromatic ring structures, hydrophobicity, and thermostability have made them recalcitrant and highly persistent in the environment. PA...

journal_title：Frontiers in microbiology

authors： Patel AB,Shaikh S,Jain KR,Desai C,Madamwar D

更新日期：2020-11-05 00:00:00

abstract：:The use of additives in food products has become an important public health concern. In recent reports, dietary emulsifiers have been shown to affect the gut microbiota, contributing to a pro-inflammatory phenotype and metabolic syndrome. So far, it is not yet known whether similar microbiome shifts are observable for...

journal_title：Frontiers in microbiology

authors： Miclotte L,De Paepe K,Rymenans L,Callewaert C,Raes J,Rajkovic A,Van Camp J,Van de Wiele T

更新日期：2020-11-05 00:00:00

abstract：:MicroRNAs (miRNAs) have been demonstrated for their involvement in virus biology and pathogenesis, including functioning as key determinants of virally-induced cancers. As an important oncogenic α-herpesvirus affecting poultry health, Marek's disease virus serotype 1 [Gallid alphaherpesvirus 2 (GaHV-2)] induces rapid-...

journal_title：Frontiers in microbiology

authors： Zhu ZJ,Teng M,Li HZ,Zheng LP,Liu JL,Chai SJ,Yao YX,Nair V,Zhang GP,Luo J

更新日期：2020-11-03 00:00:00

abstract：:Pharmaceutical contaminants (PCs) have been recognized as emerging contaminants causing unexpected consequences to environment and humans. There is an urgent need for development of efficient technologies to treat these PCs from water. The current study has investigated the removal capacity of a green microalgal speci...

journal_title：Frontiers in microbiology

authors： Xiong JQ,Cui P,Ru S

更新日期：2020-11-03 00:00:00

abstract：:In this study, compound microbial inoculants, including three Bacillus strains and one Yeast strain, were inoculated into swine manure composting to explore the effects on antibiotic resistance genes (ARGs) and mobile genetic elements (MGEs), microbial community structure, and pathogenic bacteria. The results indicate...

journal_title：Frontiers in microbiology

authors： Li K,Cao R,Mo S,Yao R,Ren Z,Wu J

更新日期：2020-11-03 00:00:00

abstract：:Previous studies on vancomycin-intermediate Staphylococcus aureus (VISA) have mainly focused on drug resistance, the evolution of differences in virulence between VISA and vancomycin-sensitive S. aureus (VSSA) requires further investigation. To address this issue, in this study, we compared the virulence and toxin pro...

journal_title：Frontiers in microbiology

authors： Jin Y,Yu X,Zhang S,Kong X,Chen W,Luo Q,Zheng B,Xiao Y

更新日期：2020-10-30 00:00:00

abstract：:In this article, we present our three-class course sequence to educate students about microbiome analysis and metagenomics through experiential learning by taking them from inquiry to analysis of the microbiome: Molecular Ecology Lab, Bioinformatics, and Computational Microbiome Analysis. Students developed hypotheses...

journal_title：Frontiers in microbiology

authors： Rosen GL,Hammrich P

更新日期：2020-10-29 00:00:00

abstract：:In the industry of fermented food and beverages, yeast cultures are often selected and standardized in order to ensure a better control of fermentation and a more stable product over time. Several studies have shown that the organoleptic characteristics of fermented products reflect geographic variations of the microb...

journal_title：Frontiers in microbiology

authors： Di Paola M,Meriggi N,Cavalieri D

更新日期：2020-10-29 00:00:00